Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DHX58Q96C10 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DHX58Q96C10 FAM45BP-202ENST00000592932 1624 ntBASIC17.69■□□□□ 0.42
DHX58Q96C10 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 AL139400.1-201ENST00000366220 510 ntBASIC17.68■□□□□ 0.42
DHX58Q96C10 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.68■□□□□ 0.42
DHX58Q96C10 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.68■□□□□ 0.42
DHX58Q96C10 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DHX58Q96C10 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 AC126365.1-201ENST00000578585 1514 ntBASIC17.67■□□□□ 0.42
DHX58Q96C10 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.67■□□□□ 0.42
DHX58Q96C10 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 RPL37AP1-201ENST00000412502 279 ntBASIC17.67■□□□□ 0.42
DHX58Q96C10 AC074338.1-201ENST00000416825 156 ntBASIC17.67■□□□□ 0.42
DHX58Q96C10 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 HLA-J-203ENST00000494367 1087 ntBASIC17.67■□□□□ 0.42
DHX58Q96C10 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.67■□□□□ 0.42
DHX58Q96C10 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 AL009178.2-201ENST00000597278 2719 ntBASIC17.67■□□□□ 0.42
DHX58Q96C10 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.67■□□□□ 0.42
DHX58Q96C10 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DHX58Q96C10 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.67■□□□□ 0.42
DHX58Q96C10 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
DHX58Q96C10 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
DHX58Q96C10 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms