Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 AC005229.1-201ENST00000392885 409 ntBASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 KRT18P43-201ENST00000469825 1281 ntBASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHKBP1Q8TBC3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHKBP1Q8TBC3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHKBP1Q8TBC3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 AC005252.2-201ENST00000624630 1141 ntBASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHKBP1Q8TBC3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 AC099336.1-201ENST00000417053 1171 ntBASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms