Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 AC007967.2-201ENST00000432613 625 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 AC098859.1-201ENST00000502915 1238 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 RNA5SP416-201ENST00000516838 111 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 RARRES2P8-201ENST00000566335 367 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 AC024267.1-201ENST00000582320 895 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 IL9RP2-201ENST00000423948 1312 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 KRT8P44-201ENST00000441609 1350 ntBASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DNAAF1Q8NEP3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AC127383.1-201ENST00000444697 1800 ntBASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AC232323.1-201ENST00000540724 2099 ntBASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 REXO1L5P-201ENST00000622260 2098 ntBASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AC105233.2-201ENST00000523697 349 ntBASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AF228730.5-201ENST00000530288 346 ntBASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DNAAF1Q8NEP3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DNAAF1Q8NEP3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DNAAF1Q8NEP3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.82□□□□□ -0.2
DNAAF1Q8NEP3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
DNAAF1Q8NEP3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DNAAF1Q8NEP3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms