Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC83Q8IWF9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC83Q8IWF9 AL136379.1-201ENST00000623471 2642 ntBASIC18.39■□□□□ 0.54
CCDC83Q8IWF9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC83Q8IWF9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC084364.1-201ENST00000551967 1556 ntBASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC099063.4-201ENST00000641099 1602 ntBASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC092865.5-201ENST00000545435 363 ntBASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AP001059.3-201ENST00000619053 235 ntBASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC83Q8IWF9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 AC027612.4-201ENST00000605371 583 ntBASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 AL589739.1-201ENST00000607720 493 ntBASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC83Q8IWF9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 AL080243.2-201ENST00000418783 582 ntBASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CNN2P11-201ENST00000429351 262 ntBASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC83Q8IWF9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms