Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 SLC22A20-204ENST00000530038 1673 ntBASIC11.99□□□□□ -0.49
NTF3P20783 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
NTF3P20783 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 REXO1L2P-201ENST00000425429 2069 ntBASIC11.99□□□□□ -0.49
NTF3P20783 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NTF3P20783 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.99□□□□□ -0.49
NTF3P20783 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.99□□□□□ -0.49
NTF3P20783 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 BEND3P1-201ENST00000421591 1944 ntBASIC11.98□□□□□ -0.49
NTF3P20783 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 U82695.1-201ENST00000635752 1889 ntBASIC11.98□□□□□ -0.49
NTF3P20783 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 AL353732.1-201ENST00000569618 1459 ntBASIC11.98□□□□□ -0.49
NTF3P20783 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 AC073957.3-201ENST00000609998 6758 ntBASIC11.98□□□□□ -0.49
NTF3P20783 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NTF3P20783 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.98□□□□□ -0.49
NTF3P20783 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.98□□□□□ -0.49
NTF3P20783 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 AC087641.1-201ENST00000557561 1021 ntBASIC11.98□□□□□ -0.49
NTF3P20783 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 AF228730.7-201ENST00000641842 219 ntBASIC11.98□□□□□ -0.49
NTF3P20783 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.98□□□□□ -0.49
NTF3P20783 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.98□□□□□ -0.49
NTF3P20783 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NTF3P20783 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
NTF3P20783 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NTF3P20783 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.97□□□□□ -0.49
NTF3P20783 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NTF3P20783 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms