Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 AC243562.2-201ENST00000561247 970 ntBASIC15.65■□□□□ 0.1
XRCC1P18887 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.65■□□□□ 0.1
XRCC1P18887 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 AC008738.7-201ENST00000609744 511 ntBASIC15.65■□□□□ 0.1
XRCC1P18887 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.65■□□□□ 0.1
XRCC1P18887 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XRCC1P18887 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.65■□□□□ 0.1
XRCC1P18887 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
XRCC1P18887 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
XRCC1P18887 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
XRCC1P18887 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.64■□□□□ 0.09
XRCC1P18887 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.64■□□□□ 0.09
XRCC1P18887 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.64■□□□□ 0.09
XRCC1P18887 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
XRCC1P18887 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 AL035633.1-201ENST00000406139 838 ntBASIC15.64■□□□□ 0.09
XRCC1P18887 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.64■□□□□ 0.09
XRCC1P18887 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.64■□□□□ 0.09
XRCC1P18887 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.64■□□□□ 0.09
XRCC1P18887 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.64■□□□□ 0.09
XRCC1P18887 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.64■□□□□ 0.09
XRCC1P18887 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.64■□□□□ 0.09
XRCC1P18887 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.64■□□□□ 0.09
XRCC1P18887 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.64■□□□□ 0.09
XRCC1P18887 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
XRCC1P18887 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
XRCC1P18887 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
XRCC1P18887 CICP13-201ENST00000422015 2789 ntBASIC15.64■□□□□ 0.09
XRCC1P18887 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
XRCC1P18887 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
XRCC1P18887 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
XRCC1P18887 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
XRCC1P18887 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.63■□□□□ 0.09
XRCC1P18887 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.63■□□□□ 0.09
XRCC1P18887 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
XRCC1P18887 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 SPTLC1P1-201ENST00000447199 261 ntBASIC15.63■□□□□ 0.09
XRCC1P18887 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.63■□□□□ 0.09
XRCC1P18887 SDHAP3-202ENST00000515467 728 ntBASIC15.63■□□□□ 0.09
XRCC1P18887 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.63■□□□□ 0.09
XRCC1P18887 AC190387.1-201ENST00000551683 408 ntBASIC15.63■□□□□ 0.09
XRCC1P18887 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.63■□□□□ 0.09
XRCC1P18887 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
XRCC1P18887 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
XRCC1P18887 AC004840.1-201ENST00000636359 365 ntBASIC15.63■□□□□ 0.09
XRCC1P18887 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
XRCC1P18887 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 NFIC-211ENST00000641145 8399 ntBASIC15.63■□□□□ 0.09
XRCC1P18887 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
XRCC1P18887 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
XRCC1P18887 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms