Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.3■□□□□ 0.2
SOD2P04179 CALR4P-201ENST00000431943 946 ntBASIC16.3■□□□□ 0.2
SOD2P04179 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.3■□□□□ 0.2
SOD2P04179 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SOD2P04179 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.3■□□□□ 0.2
SOD2P04179 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SOD2P04179 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 AC244452.3-201ENST00000636814 210 ntBASIC16.3■□□□□ 0.2
SOD2P04179 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.3■□□□□ 0.2
SOD2P04179 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SOD2P04179 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOD2P04179 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SOD2P04179 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SOD2P04179 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SOD2P04179 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SOD2P04179 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.29■□□□□ 0.2
SOD2P04179 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 MIR663B-201ENST00000408361 115 ntBASIC16.29■□□□□ 0.2
SOD2P04179 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.29■□□□□ 0.2
SOD2P04179 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.29■□□□□ 0.2
SOD2P04179 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.29■□□□□ 0.2
SOD2P04179 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 FAM8A4P-201ENST00000435433 1213 ntBASIC16.29■□□□□ 0.2
SOD2P04179 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.29■□□□□ 0.2
SOD2P04179 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.29■□□□□ 0.2
SOD2P04179 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SOD2P04179 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.29■□□□□ 0.2
SOD2P04179 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.29■□□□□ 0.2
SOD2P04179 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.29■□□□□ 0.2
SOD2P04179 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SOD2P04179 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOD2P04179 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SOD2P04179 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOD2P04179 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SOD2P04179 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SOD2P04179 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 AC024909.3-201ENST00000611513 2257 ntBASIC16.28■□□□□ 0.2
SOD2P04179 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOD2P04179 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.28■□□□□ 0.2
SOD2P04179 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOD2P04179 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.28■□□□□ 0.2
SOD2P04179 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SOD2P04179 EIF3FP3-201ENST00000434851 1086 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms