Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR4O95977 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.54■□□□□ 0.08
S1PR4O95977 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR4O95977 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 AC087499.5-201ENST00000452760 1342 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 AC015922.1-201ENST00000421102 1152 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 AC097493.3-201ENST00000509725 367 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 IGHV3-42-201ENST00000520410 361 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR4O95977 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR4O95977 ADAM3B-201ENST00000569937 840 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.53■□□□□ 0.08
S1PR4O95977 AC015910.1-201ENST00000579400 975 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.53■□□□□ 0.08
S1PR4O95977 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 AL109936.8-201ENST00000641772 604 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.53■□□□□ 0.08
S1PR4O95977 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 AL513477.1-201ENST00000602865 2407 ntBASIC15.53■□□□□ 0.08
S1PR4O95977 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR4O95977 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
S1PR4O95977 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
S1PR4O95977 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR4O95977 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
S1PR4O95977 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 TOMM22P5-201ENST00000416399 439 ntBASIC15.52■□□□□ 0.08
S1PR4O95977 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.52■□□□□ 0.08
S1PR4O95977 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
S1PR4O95977 SDHAP3-202ENST00000515467 728 ntBASIC15.52■□□□□ 0.08
S1PR4O95977 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR4O95977 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC15.52■□□□□ 0.08
S1PR4O95977 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.52■□□□□ 0.08
S1PR4O95977 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 AL844908.2-201ENST00000609461 460 ntBASIC15.52■□□□□ 0.08
S1PR4O95977 AC074044.1-201ENST00000609673 707 ntBASIC15.52■□□□□ 0.08
S1PR4O95977 AL590560.3-201ENST00000623350 461 ntBASIC15.52■□□□□ 0.08
S1PR4O95977 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR4O95977 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
S1PR4O95977 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
S1PR4O95977 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
S1PR4O95977 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
S1PR4O95977 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
S1PR4O95977 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.52■□□□□ 0.07
S1PR4O95977 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.52■□□□□ 0.07
S1PR4O95977 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
S1PR4O95977 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.52■□□□□ 0.07
S1PR4O95977 CICP11-201ENST00000434745 2827 ntBASIC15.52■□□□□ 0.07
S1PR4O95977 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms