Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDRT1O95170 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDRT1O95170 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 HNRNPDP1-201ENST00000439535 754 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 AC108073.2-201ENST00000464002 357 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 UNC93B7-201ENST00000509439 705 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CDRT1O95170 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.03□□□□□ -0.16
CDRT1O95170 OR7E47P-204ENST00000575924 449 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 TP73-AS1-207ENST00000624167 988 ntBASIC14.03□□□□□ -0.16
CDRT1O95170 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
CDRT1O95170 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDRT1O95170 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.03□□□□□ -0.16
CDRT1O95170 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDRT1O95170 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CDRT1O95170 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.02□□□□□ -0.16
CDRT1O95170 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.02□□□□□ -0.16
CDRT1O95170 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CDRT1O95170 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDRT1O95170 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CDRT1O95170 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CDRT1O95170 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.02□□□□□ -0.17
CDRT1O95170 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDRT1O95170 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.02□□□□□ -0.17
CDRT1O95170 FAM197Y8-203ENST00000450145 560 ntBASIC14.02□□□□□ -0.17
CDRT1O95170 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.02□□□□□ -0.17
CDRT1O95170 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.02□□□□□ -0.17
CDRT1O95170 ACTL9-202ENST00000612068 1252 ntBASIC14.02□□□□□ -0.17
CDRT1O95170 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CDRT1O95170 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.02□□□□□ -0.17
CDRT1O95170 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDRT1O95170 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
CDRT1O95170 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDRT1O95170 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDRT1O95170 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDRT1O95170 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.01□□□□□ -0.17
CDRT1O95170 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.01□□□□□ -0.17
CDRT1O95170 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDRT1O95170 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 AC018892.3-201ENST00000623986 2499 ntBASIC14.01□□□□□ -0.17
CDRT1O95170 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.01□□□□□ -0.17
CDRT1O95170 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDRT1O95170 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms