Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 AL390719.2-201ENST00000606993 987 ntBASIC13.62□□□□□ -0.23
CCNKO75909 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNKO75909 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCNKO75909 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNKO75909 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.61□□□□□ -0.23
CCNKO75909 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 RNF126P1-202ENST00000569893 925 ntBASIC13.61□□□□□ -0.23
CCNKO75909 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNKO75909 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNKO75909 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNKO75909 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNKO75909 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 MTHFR-210ENST00000641407 2387 ntBASIC13.6□□□□□ -0.23
CCNKO75909 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.6□□□□□ -0.23
CCNKO75909 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNKO75909 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 STARP1-201ENST00000397973 869 ntBASIC13.6□□□□□ -0.23
CCNKO75909 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 AC122714.2-201ENST00000502787 707 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms