Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.65□□□□□ -0.22
UPK1BO75841 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.65□□□□□ -0.22
UPK1BO75841 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 AP000867.4-201ENST00000641616 219 ntBASIC13.65□□□□□ -0.22
UPK1BO75841 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UPK1BO75841 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
UPK1BO75841 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK1BO75841 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.23
UPK1BO75841 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.65□□□□□ -0.23
UPK1BO75841 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
UPK1BO75841 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.65□□□□□ -0.23
UPK1BO75841 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
UPK1BO75841 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UPK1BO75841 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 BEND3P3-201ENST00000611030 2440 ntBASIC13.64□□□□□ -0.23
UPK1BO75841 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UPK1BO75841 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
UPK1BO75841 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK1BO75841 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK1BO75841 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK1BO75841 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
UPK1BO75841 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK1BO75841 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC140113.3-201ENST00000605663 199 ntBASIC13.64□□□□□ -0.23
UPK1BO75841 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.64□□□□□ -0.23
UPK1BO75841 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 AC114271.1-201ENST00000612689 2813 ntBASIC13.64□□□□□ -0.23
UPK1BO75841 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
UPK1BO75841 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK1BO75841 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
UPK1BO75841 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK1BO75841 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 AC055811.4-201ENST00000624039 1754 ntBASIC13.63□□□□□ -0.23
UPK1BO75841 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK1BO75841 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK1BO75841 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK1BO75841 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms