Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 RN7SL828P-201ENST00000607615 303 ntBASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 MIR6080-201ENST00000617359 66 ntBASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 AP001059.3-201ENST00000619053 235 ntBASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 KRT8P44-201ENST00000441609 1350 ntBASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 KRT8P12-202ENST00000472924 1397 ntBASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEUROD4Q9HD90 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 RPL5P21-201ENST00000404620 815 ntBASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 AL133215.2-201ENST00000609242 977 ntBASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 RN7SL832P-201ENST00000607781 1756 ntBASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NEUROD4Q9HD90 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEUROD4Q9HD90 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEUROD4Q9HD90 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms