Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 MIR7706-201ENST00000613747 67 ntBASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AC073592.4-201ENST00000623827 446 ntBASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 KRT8P39-201ENST00000396270 1433 ntBASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCBE1Q6UXH8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.02□□□□□ -0.16
CCBE1Q6UXH8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 AP002414.1-201ENST00000391405 1147 ntBASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.02□□□□□ -0.17
CCBE1Q6UXH8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 AC118758.2-201ENST00000614242 2813 ntBASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 AC148477.5-201ENST00000625164 1645 ntBASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCBE1Q6UXH8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms