Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.09■□□□□ 0.17
ATXN3P54252 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.09■□□□□ 0.17
ATXN3P54252 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.09■□□□□ 0.17
ATXN3P54252 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.09■□□□□ 0.17
ATXN3P54252 AC245100.3-201ENST00000441281 285 ntBASIC16.09■□□□□ 0.17
ATXN3P54252 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.09■□□□□ 0.17
ATXN3P54252 RN7SL837P-201ENST00000463010 287 ntBASIC16.09■□□□□ 0.17
ATXN3P54252 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.09■□□□□ 0.17
ATXN3P54252 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.09■□□□□ 0.17
ATXN3P54252 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.09■□□□□ 0.17
ATXN3P54252 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.09■□□□□ 0.17
ATXN3P54252 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.09■□□□□ 0.17
ATXN3P54252 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.09■□□□□ 0.17
ATXN3P54252 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATXN3P54252 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.09■□□□□ 0.17
ATXN3P54252 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATXN3P54252 AP003680.1-201ENST00000598970 3660 ntBASIC16.08■□□□□ 0.17
ATXN3P54252 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATXN3P54252 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATXN3P54252 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.08■□□□□ 0.17
ATXN3P54252 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATXN3P54252 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.08■□□□□ 0.17
ATXN3P54252 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.08■□□□□ 0.17
ATXN3P54252 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATXN3P54252 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.08■□□□□ 0.16
ATXN3P54252 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATXN3P54252 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.08■□□□□ 0.16
ATXN3P54252 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 SDHAP3-202ENST00000515467 728 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
ATXN3P54252 AL512361.1-201ENST00000554200 418 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
ATXN3P54252 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 AC133552.6-201ENST00000613406 534 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.08■□□□□ 0.16
ATXN3P54252 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 TUBB8P12-201ENST00000308911 1335 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 TUBB7P-202ENST00000428444 1305 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 TUBB8P7-204ENST00000567960 1332 ntBASIC16.08■□□□□ 0.16
ATXN3P54252 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATXN3P54252 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
ATXN3P54252 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATXN3P54252 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ATXN3P54252 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 AC114501.2-201ENST00000439631 535 ntBASIC16.07■□□□□ 0.16
ATXN3P54252 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATXN3P54252 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.07■□□□□ 0.16
ATXN3P54252 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.07■□□□□ 0.16
ATXN3P54252 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.07■□□□□ 0.16
ATXN3P54252 AC123567.1-201ENST00000548294 1261 ntBASIC16.07■□□□□ 0.16
ATXN3P54252 AP005482.1-201ENST00000563722 1273 ntBASIC16.07■□□□□ 0.16
ATXN3P54252 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms