Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CEACAM3P40198 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CEACAM3P40198 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CEACAM3P40198 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.84□□□□□ -0.35
CEACAM3P40198 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CEACAM3P40198 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.84□□□□□ -0.35
CEACAM3P40198 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
CEACAM3P40198 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CEACAM3P40198 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CEACAM3P40198 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CEACAM3P40198 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.83□□□□□ -0.35
CEACAM3P40198 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CEACAM3P40198 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CEACAM3P40198 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CEACAM3P40198 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CEACAM3P40198 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.83□□□□□ -0.35
CEACAM3P40198 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CEACAM3P40198 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AL512361.1-201ENST00000554200 418 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 HNRNPUP1-201ENST00000554987 333 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.83□□□□□ -0.36
CEACAM3P40198 AC025048.3-201ENST00000590609 569 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 AC005702.4-201ENST00000618393 416 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CEACAM3P40198 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 Z97205.2-201ENST00000564697 1639 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CEACAM3P40198 PRAL-201ENST00000624952 3286 ntBASIC12.83□□□□□ -0.36
CEACAM3P40198 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CEACAM3P40198 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 TSPY26P-202ENST00000565928 3884 ntBASIC12.82□□□□□ -0.36
CEACAM3P40198 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.82□□□□□ -0.36
CEACAM3P40198 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.82□□□□□ -0.36
CEACAM3P40198 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 AC005498.2-205ENST00000593218 784 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms