Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
KRT3P12035 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 AC112693.3-201ENST00000624819 1983 ntBASIC16.53■□□□□ 0.24
KRT3P12035 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 C18orf15-201ENST00000623680 2534 ntBASIC16.53■□□□□ 0.24
KRT3P12035 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT3P12035 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 AC087499.5-201ENST00000452760 1342 ntBASIC16.53■□□□□ 0.24
KRT3P12035 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT3P12035 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT3P12035 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 DUX4L27-201ENST00000554796 1261 ntBASIC16.53■□□□□ 0.24
KRT3P12035 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT3P12035 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT3P12035 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT3P12035 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT3P12035 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 AC138035.3-201ENST00000622706 2791 ntBASIC16.53■□□□□ 0.24
KRT3P12035 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT3P12035 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT3P12035 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 AL109954.1-202ENST00000564051 2148 ntBASIC16.52■□□□□ 0.24
KRT3P12035 DBET-201ENST00000630918 3363 ntBASIC16.52■□□□□ 0.24
KRT3P12035 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT3P12035 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT3P12035 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT3P12035 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT3P12035 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT3P12035 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT3P12035 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT3P12035 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KRT3P12035 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 AC068418.2-201ENST00000577309 3703 ntBASIC16.52■□□□□ 0.23
KRT3P12035 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
KRT3P12035 AC100757.3-201ENST00000622361 1406 ntBASIC16.52■□□□□ 0.23
KRT3P12035 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT3P12035 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT3P12035 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT3P12035 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT3P12035 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.51■□□□□ 0.23
KRT3P12035 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT3P12035 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms