Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 KRT8P12-202ENST00000472924 1397 ntBASIC14.6□□□□□ -0.07
HNRNPCL4P0DMR1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 AC026150.2-201ENST00000564693 1156 ntBASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 AL133215.2-201ENST00000609242 977 ntBASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HNRNPCL4P0DMR1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HNRNPCL4P0DMR1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 SPDYE14P-201ENST00000442619 822 ntBASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 AC112482.1-201ENST00000492080 688 ntBASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 AC009093.7-201ENST00000623853 1223 ntBASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.58□□□□□ -0.08
HNRNPCL4P0DMR1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms