Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.16□□□□□ -0.14
HLA-DPB1P04440 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 AP002472.1-201ENST00000577490 586 ntBASIC14.15□□□□□ -0.14
HLA-DPB1P04440 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DPB1P04440 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
HLA-DPB1P04440 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AC005912.2-201ENST00000619492 2400 ntBASIC14.14□□□□□ -0.15
HLA-DPB1P04440 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.14□□□□□ -0.15
HLA-DPB1P04440 AC091812.2-201ENST00000619081 385 ntBASIC14.14□□□□□ -0.15
HLA-DPB1P04440 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms