Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 GPR89P-201ENST00000407924 1495 ntBASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AC016769.1-201ENST00000409132 1010 ntBASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 BX276092.2-201ENST00000417668 665 ntBASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 OR2A1-AS1-207ENST00000486094 819 ntBASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 IGHV3-52-201ENST00000519770 353 ntBASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 RAB43-208ENST00000615093 783 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC8.66□□□□□ -1.02
CHKB-CPT1BH3BT56 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PC-208ENST00000529047 1607 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC00167-201ENST00000530583 1419 ntBASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HYI-206ENST00000372434 1025 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 APTR-203ENST00000430801 583 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM207BP-201ENST00000447172 505 ntBASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 OR2A1-AS1-201ENST00000462305 773 ntBASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms