Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
C12orf4Q9NQ89 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
C12orf4Q9NQ89 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
C12orf4Q9NQ89 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.77□□□□□ -0.2
C12orf4Q9NQ89 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
C12orf4Q9NQ89 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
C12orf4Q9NQ89 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 AF238378.1-201ENST00000526806 358 ntBASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 AC008735.5-201ENST00000623544 497 ntBASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 LINC00552-201ENST00000625151 2579 ntBASIC13.77□□□□□ -0.21
C12orf4Q9NQ89 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RNU1-129P-201ENST00000384064 167 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 MIR3909-201ENST00000579518 119 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 U1.21-201ENST00000580816 167 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 AL356488.2-201ENST00000602755 427 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 AC005593.1-201ENST00000624894 515 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 AC011700.1-201ENST00000610409 2627 ntBASIC13.76□□□□□ -0.21
C12orf4Q9NQ89 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C12orf4Q9NQ89 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms