Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 SLC25A24-204ENST00000569674 2357 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 CTBP2P6-201ENST00000526402 1229 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC254633.1-201ENST00000606790 345 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 MIEF1-215ENST00000637854 213 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL137077.2-201ENST00000635124 1608 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 AL109809.1-201ENST00000418979 1367 ntBASIC14.21□□□□□ -0.13
CHD8Q9HCK8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHD8Q9HCK8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 AP001282.1-201ENST00000531301 1499 ntBASIC14.21□□□□□ -0.14
CHD8Q9HCK8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CHD8Q9HCK8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TNXA-203ENST00000507684 2038 ntBASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 KRT8P14-201ENST00000414254 1442 ntBASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 HYMAI-201ENST00000635591 3347 ntBASIC14.2□□□□□ -0.14
CHD8Q9HCK8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CHD8Q9HCK8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms