Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 AC092135.3-201ENST00000624151 1846 ntBASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 KRT8P26-201ENST00000534154 1276 ntBASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SEC22CQ9BRL7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 AC027612.1-201ENST00000445234 2395 ntBASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 PRYP5-201ENST00000451909 266 ntBASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SEC22CQ9BRL7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms