Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TUBA1CQ9BQE3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBA1CQ9BQE3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TUBA1CQ9BQE3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBA1CQ9BQE3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 AC041040.2-201ENST00000622926 2899 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 FLJ16779-201ENST00000612722 7638 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 HMGN1P19-201ENST00000436976 333 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 AC008267.7-201ENST00000624570 1194 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 AC126755.1-201ENST00000525846 6405 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBA1CQ9BQE3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 GPS2P2-201ENST00000430745 888 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 RBPMS2P1-201ENST00000437762 623 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AL138918.1-201ENST00000568306 659 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AGAP7P-201ENST00000582299 2062 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AGAP14-201ENST00000624701 2060 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 AC005840.4-201ENST00000541242 2494 ntBASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TUBA1CQ9BQE3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms