Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TMEM54Q969K7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TMEM54Q969K7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM54Q969K7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TMEM54Q969K7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TMEM54Q969K7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 MIR770-201ENST00000390219 98 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 INGX-202ENST00000489074 768 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 AC104794.3-201ENST00000566840 1248 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 AC004790.1-201ENST00000612686 536 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 HYMAI-201ENST00000635591 3347 ntBASIC13.77□□□□□ -0.21
TMEM54Q969K7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM54Q969K7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM54Q969K7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.76□□□□□ -0.21
TMEM54Q969K7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 DOC2GP-202ENST00000514950 1163 ntBASIC13.76□□□□□ -0.21
TMEM54Q969K7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AL645728.2-202ENST00000641679 227 ntBASIC13.76□□□□□ -0.21
TMEM54Q969K7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AC023024.2-201ENST00000623561 1993 ntBASIC13.76□□□□□ -0.21
TMEM54Q969K7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM54Q969K7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms