Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LINC02228-204ENST00000642115 2962 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 RWDD4P1-201ENST00000488019 565 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 RN7SL204P-201ENST00000582831 262 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC097359.3-201ENST00000603982 1210 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AL844908.2-201ENST00000609461 460 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 AC092127.1-201ENST00000567093 3455 ntBASIC15.97■□□□□ 0.15
PTCD2Q8WV60 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 CETN4P-206ENST00000642099 2168 ntBASIC15.96■□□□□ 0.15
PTCD2Q8WV60 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 BTG3P1-201ENST00000435859 716 ntBASIC15.96■□□□□ 0.15
PTCD2Q8WV60 ZNF736P1Y-201ENST00000440402 1276 ntBASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 TSPY16P-201ENST00000449843 468 ntBASIC15.96■□□□□ 0.15
PTCD2Q8WV60 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCD2Q8WV60 AC127383.1-201ENST00000444697 1800 ntBASIC15.96■□□□□ 0.14
PTCD2Q8WV60 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTCD2Q8WV60 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.96■□□□□ 0.14
PTCD2Q8WV60 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTCD2Q8WV60 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTCD2Q8WV60 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.96■□□□□ 0.14
PTCD2Q8WV60 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
PTCD2Q8WV60 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 AC023157.3-201ENST00000619086 2088 ntBASIC15.95■□□□□ 0.14
PTCD2Q8WV60 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCD2Q8WV60 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms