Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 FAM86HP-204ENST00000513466 959 ntBASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 Z93015.1-201ENST00000451718 390 ntBASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 C2orf69P2-201ENST00000562032 1123 ntBASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 MTHFR-217ENST00000641820 1569 ntBASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPOQ8N3V7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AC004945.1-201ENST00000416738 983 ntBASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms