Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC116Q8IYX3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 TREML5P-201ENST00000421694 576 ntBASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC116Q8IYX3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 MIR943-201ENST00000401286 94 ntBASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 AC092580.3-201ENST00000430932 139 ntBASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 AL512361.1-201ENST00000554200 418 ntBASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 DUX4L27-201ENST00000554796 1261 ntBASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RN7SL121P-201ENST00000584223 273 ntBASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms