Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 WFDC1-204ENST00000613603 549 ntBASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 RPL13AP25-201ENST00000484130 612 ntBASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 HYMAI-201ENST00000635591 3347 ntBASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 SSR4P1-203ENST00000599569 2260 ntBASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 DRD5P1-201ENST00000456605 1438 ntBASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
C9orf40Q8IXQ3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.4□□□□□ -0.11
C9orf40Q8IXQ3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
C9orf40Q8IXQ3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms