Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGCS1Q01581 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.15■□□□□ 0.02
HMGCS1Q01581 AC023024.2-201ENST00000623561 1993 ntBASIC15.15■□□□□ 0.02
HMGCS1Q01581 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 AC148477.4-201ENST00000613430 1793 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 AL645939.2-201ENST00000427340 991 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 HIST3H2BA-201ENST00000436555 524 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 MTND6P24-201ENST00000440466 518 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 RN7SL828P-201ENST00000607615 303 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 AL133215.2-201ENST00000609242 977 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 GPALPP1-207ENST00000611650 899 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 CICP24-201ENST00000605464 2705 ntBASIC15.14■□□□□ 0.01
HMGCS1Q01581 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HMGCS1Q01581 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGCS1Q01581 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AC126365.1-201ENST00000578585 1514 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AC254562.1-201ENST00000417586 456 ntBASIC15.13■□□□□ 0.01
HMGCS1Q01581 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGCS1Q01581 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGCS1Q01581 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms