Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.11■□□□□ 0.17
ATXN3P54252 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.11■□□□□ 0.17
ATXN3P54252 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.11■□□□□ 0.17
ATXN3P54252 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.11■□□□□ 0.17
ATXN3P54252 AC026979.3-201ENST00000607315 403 ntBASIC16.11■□□□□ 0.17
ATXN3P54252 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.11■□□□□ 0.17
ATXN3P54252 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 AC079776.1-201ENST00000401540 1152 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.1■□□□□ 0.17
ATXN3P54252 MYCLP2-201ENST00000449268 967 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AC022210.1-201ENST00000449856 793 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AC092658.1-201ENST00000505836 891 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AP002490.2-201ENST00000524791 560 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATXN3P54252 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.1■□□□□ 0.17
ATXN3P54252 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 BANF1P1-201ENST00000553684 263 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AC024267.1-201ENST00000582320 895 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.1■□□□□ 0.17
ATXN3P54252 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.1■□□□□ 0.17
ATXN3P54252 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.1■□□□□ 0.17
ATXN3P54252 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ATXN3P54252 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
ATXN3P54252 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ATXN3P54252 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.1■□□□□ 0.17
ATXN3P54252 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATXN3P54252 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATXN3P54252 AC006538.1-201ENST00000567905 1585 ntBASIC16.09■□□□□ 0.17
ATXN3P54252 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms