Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.86□□□□□ -0.03
CDKN2CP42773 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKN2CP42773 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDKN2CP42773 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKN2CP42773 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKN2CP42773 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKN2CP42773 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 AJ011931.1-201ENST00000618749 2492 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKN2CP42773 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 MIR574-201ENST00000385209 96 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 FAM58DP-201ENST00000428076 619 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.85□□□□□ -0.03
CDKN2CP42773 MKNK2P1-201ENST00000437526 628 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CDKN2CP42773 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 KRT18P58-201ENST00000527480 1120 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKN2CP42773 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKN2CP42773 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 AC022145.2-201ENST00000598203 171 ntBASIC14.85□□□□□ -0.03
CDKN2CP42773 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKN2CP42773 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDKN2CP42773 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKN2CP42773 LINC00552-201ENST00000625151 2579 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 HIST3H2BA-201ENST00000436555 524 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.84□□□□□ -0.03
CDKN2CP42773 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKN2CP42773 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKN2CP42773 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKN2CP42773 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKN2CP42773 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKN2CP42773 AC105021.1-202ENST00000570572 669 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 AC105339.1-204ENST00000636249 355 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 CICP11-201ENST00000434745 2827 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDKN2CP42773 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 FGD5P1-202ENST00000614866 2498 ntBASIC14.84□□□□□ -0.03
CDKN2CP42773 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKN2CP42773 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN2CP42773 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms