Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40LGP29965 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.98□□□□□ -0.17
CD40LGP29965 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40LGP29965 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CD40LGP29965 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40LGP29965 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40LGP29965 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40LGP29965 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CD40LGP29965 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 AC105206.1-202ENST00000314927 2368 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 AC148477.5-201ENST00000625164 1645 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 AC079776.2-201ENST00000641154 1609 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 ATP5G2P1-201ENST00000433580 426 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.97□□□□□ -0.17
CD40LGP29965 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.97□□□□□ -0.17
CD40LGP29965 RN7SL606P-201ENST00000472779 293 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.97□□□□□ -0.17
CD40LGP29965 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 AC009533.2-201ENST00000543664 586 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 LINC01711-201ENST00000598340 967 ntBASIC13.97□□□□□ -0.17
CD40LGP29965 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.97□□□□□ -0.17
CD40LGP29965 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD40LGP29965 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CD40LGP29965 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40LGP29965 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD40LGP29965 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 LINC00982-205ENST00000420957 435 ntBASIC13.96□□□□□ -0.17
CD40LGP29965 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 AC245100.5-201ENST00000452108 331 ntBASIC13.96□□□□□ -0.17
CD40LGP29965 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 TOB2P1-201ENST00000469761 992 ntBASIC13.96□□□□□ -0.17
CD40LGP29965 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 AP000867.3-201ENST00000524675 377 ntBASIC13.96□□□□□ -0.17
CD40LGP29965 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.96□□□□□ -0.17
CD40LGP29965 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CD40LGP29965 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.96□□□□□ -0.17
CD40LGP29965 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CD40LGP29965 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CD40LGP29965 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CD40LGP29965 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD40LGP29965 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40LGP29965 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40LGP29965 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.96□□□□□ -0.18
CD40LGP29965 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms