Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 FAM58DP-201ENST00000428076 619 ntBASIC16.21■□□□□ 0.19
BRAFP15056 AC023141.5-201ENST00000458585 616 ntBASIC16.21■□□□□ 0.19
BRAFP15056 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.21■□□□□ 0.19
BRAFP15056 AL138918.1-201ENST00000568306 659 ntBASIC16.21■□□□□ 0.19
BRAFP15056 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.21■□□□□ 0.19
BRAFP15056 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.21■□□□□ 0.19
BRAFP15056 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
BRAFP15056 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.21■□□□□ 0.19
BRAFP15056 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.21■□□□□ 0.19
BRAFP15056 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.21■□□□□ 0.19
BRAFP15056 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRAFP15056 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BRAFP15056 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
BRAFP15056 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.21■□□□□ 0.18
BRAFP15056 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
BRAFP15056 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 AL359258.3-201ENST00000622910 2331 ntBASIC16.2■□□□□ 0.18
BRAFP15056 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 AGAP7P-201ENST00000582299 2062 ntBASIC16.2■□□□□ 0.18
BRAFP15056 AGAP14-201ENST00000624701 2060 ntBASIC16.2■□□□□ 0.18
BRAFP15056 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.2■□□□□ 0.18
BRAFP15056 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.2■□□□□ 0.18
BRAFP15056 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.2■□□□□ 0.18
BRAFP15056 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 MYO15B-237ENST00000642007 4893 ntBASIC16.2■□□□□ 0.18
BRAFP15056 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BRAFP15056 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 AC013726.1-201ENST00000563747 2285 ntBASIC16.2■□□□□ 0.18
BRAFP15056 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRAFP15056 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.2■□□□□ 0.18
BRAFP15056 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BRAFP15056 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
BRAFP15056 LINC00528-201ENST00000600723 2160 ntBASIC16.19■□□□□ 0.18
BRAFP15056 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.19■□□□□ 0.18
BRAFP15056 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.19■□□□□ 0.18
BRAFP15056 TSEN15P1-201ENST00000423257 515 ntBASIC16.19■□□□□ 0.18
BRAFP15056 AC005237.2-201ENST00000434368 219 ntBASIC16.19■□□□□ 0.18
BRAFP15056 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRAFP15056 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BRAFP15056 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms