Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.22■□□□□ 0.35
CD4P01730 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD4P01730 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 AC079328.2-201ENST00000561241 3354 ntBASIC17.21■□□□□ 0.35
CD4P01730 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 BX284668.4-201ENST00000453917 508 ntBASIC17.21■□□□□ 0.35
CD4P01730 AC091804.1-201ENST00000486888 567 ntBASIC17.21■□□□□ 0.35
CD4P01730 KRT18P25-201ENST00000508931 1278 ntBASIC17.21■□□□□ 0.35
CD4P01730 RNA5SP486-201ENST00000515961 83 ntBASIC17.21■□□□□ 0.35
CD4P01730 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD4P01730 AC006453.4-201ENST00000636949 1252 ntBASIC17.21■□□□□ 0.35
CD4P01730 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 AL662844.4-201ENST00000606367 2838 ntBASIC17.21■□□□□ 0.35
CD4P01730 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.21■□□□□ 0.35
CD4P01730 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CD4P01730 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD4P01730 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD4P01730 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.21■□□□□ 0.34
CD4P01730 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CD4P01730 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.2■□□□□ 0.34
CD4P01730 AC006449.5-201ENST00000610658 2098 ntBASIC17.2■□□□□ 0.34
CD4P01730 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 MIR1202-201ENST00000408529 83 ntBASIC17.2■□□□□ 0.34
CD4P01730 CD8B2-202ENST00000417670 633 ntBASIC17.2■□□□□ 0.34
CD4P01730 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 MTX1P1-201ENST00000440904 838 ntBASIC17.2■□□□□ 0.34
CD4P01730 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.2■□□□□ 0.34
CD4P01730 SCARNA20.5-201ENST00000516991 142 ntBASIC17.2■□□□□ 0.34
CD4P01730 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CD4P01730 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.2■□□□□ 0.34
CD4P01730 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.2■□□□□ 0.34
CD4P01730 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CD4P01730 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD4P01730 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
CD4P01730 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD4P01730 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CD4P01730 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms