Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.98□□□□□ -0.17
ALX3O95076 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ALX3O95076 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ALX3O95076 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
ALX3O95076 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ALX3O95076 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ALX3O95076 MRPL3P1-201ENST00000400109 1033 ntBASIC13.98□□□□□ -0.17
ALX3O95076 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.98□□□□□ -0.17
ALX3O95076 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 AC092910.1-201ENST00000482027 1129 ntBASIC13.98□□□□□ -0.17
ALX3O95076 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.98□□□□□ -0.17
ALX3O95076 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
ALX3O95076 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALX3O95076 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ALX3O95076 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.98□□□□□ -0.17
ALX3O95076 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.97□□□□□ -0.17
ALX3O95076 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ALX3O95076 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 HLA-A-201ENST00000376802 1334 ntBASIC13.97□□□□□ -0.17
ALX3O95076 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.97□□□□□ -0.17
ALX3O95076 AL031284.1-201ENST00000419297 478 ntBASIC13.97□□□□□ -0.17
ALX3O95076 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 AC140658.5-201ENST00000438532 169 ntBASIC13.97□□□□□ -0.17
ALX3O95076 AC009947.1-201ENST00000444350 727 ntBASIC13.97□□□□□ -0.17
ALX3O95076 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.97□□□□□ -0.17
ALX3O95076 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 AC027796.2-201ENST00000575326 344 ntBASIC13.97□□□□□ -0.17
ALX3O95076 MIR4321-201ENST00000592276 80 ntBASIC13.97□□□□□ -0.17
ALX3O95076 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 AP001282.1-201ENST00000531301 1499 ntBASIC13.97□□□□□ -0.17
ALX3O95076 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ALX3O95076 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.97□□□□□ -0.17
ALX3O95076 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALX3O95076 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms