Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LINC00473A8K010 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00473A8K010 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00473A8K010 RBPMS2P1-201ENST00000437762 623 ntBASIC12.78□□□□□ -0.36
LINC00473A8K010 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC00473A8K010 YBX1P5-201ENST00000509441 847 ntBASIC12.78□□□□□ -0.36
LINC00473A8K010 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00473A8K010 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.78□□□□□ -0.36
LINC00473A8K010 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00473A8K010 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00473A8K010 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00473A8K010 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC00473A8K010 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC00473A8K010 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 FLJ16779-201ENST00000612722 7638 ntBASIC12.77□□□□□ -0.36
LINC00473A8K010 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 AC013726.1-201ENST00000563747 2285 ntBASIC12.77□□□□□ -0.36
LINC00473A8K010 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00473A8K010 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00473A8K010 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00473A8K010 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00473A8K010 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00473A8K010 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms