Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 SPDYE7P-202ENST00000420373 878 ntBASIC17.91■□□□□ 0.46
CLIC4Q9Y696 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC4Q9Y696 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 HLA-J-203ENST00000494367 1087 ntBASIC17.9■□□□□ 0.46
CLIC4Q9Y696 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CETN4P-206ENST00000642099 2168 ntBASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC4Q9Y696 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
CLIC4Q9Y696 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLIC4Q9Y696 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.89■□□□□ 0.46
CLIC4Q9Y696 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLIC4Q9Y696 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 DNAJB3-202ENST00000449667 1266 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 AC004967.1-201ENST00000453589 447 ntBASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC4Q9Y696 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms