Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 AC133539.2-201ENST00000604757 467 ntBASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 KRT8P22-201ENST00000562317 1415 ntBASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 AC018665.1-201ENST00000622927 1362 ntBASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
PCDHGA9Q9Y5G4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 FAM86MP-201ENST00000340703 885 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AC245100.5-201ENST00000452108 331 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 RPSAP52-203ENST00000622976 1023 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGA9Q9Y5G4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 AL603832.2-201ENST00000566195 2125 ntBASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA9Q9Y5G4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms