Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 SNX18-202ENST00000343017 3140 ntBASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.83□□□□□ -0.04
THUMPD1Q9NXG2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AC126365.1-201ENST00000578585 1514 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AC023274.1-201ENST00000418278 595 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 KRT8P48-201ENST00000515599 1220 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 KRT18P58-201ENST00000527480 1120 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 OR2I1P-209ENST00000641730 5365 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 AC018892.3-201ENST00000623986 2499 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 UXT-AS1-201ENST00000590504 1525 ntBASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
THUMPD1Q9NXG2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 TIMM8BP1-201ENST00000452384 211 ntBASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 RARRES2P9-201ENST00000565168 469 ntBASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 AP3S2-216ENST00000617003 1561 ntBASIC14.81□□□□□ -0.04
THUMPD1Q9NXG2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms