Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 LINC01023-201ENST00000606054 436 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TUBB8P12-201ENST00000308911 1335 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TUBB7P-202ENST00000428444 1305 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TUBB8P7-204ENST00000567960 1332 ntBASIC18.74■□□□□ 0.59
RTN4Q9NQC3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.73■□□□□ 0.59
RTN4Q9NQC3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 LINC01238-205ENST00000567549 1107 ntBASIC18.73■□□□□ 0.59
RTN4Q9NQC3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 AC140479.7-201ENST00000636301 2332 ntBASIC18.73■□□□□ 0.59
RTN4Q9NQC3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 DNM1P41-201ENST00000623634 3350 ntBASIC18.73■□□□□ 0.59
RTN4Q9NQC3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.73■□□□□ 0.59
RTN4Q9NQC3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.72■□□□□ 0.59
RTN4Q9NQC3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ANGPTL7-201ENST00000376819 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.72■□□□□ 0.59
RTN4Q9NQC3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4Q9NQC3 AC097637.2-201ENST00000624096 1997 ntBASIC18.72■□□□□ 0.59
RTN4Q9NQC3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms