RNA–Protein interactions for RNA: ENST00000515264.1

ZNF346-IT1-201, ZNF346 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene ZNF346-IT1, Length 745 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346-IT1-201ENST00000515264 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
ZNF346-IT1-201ENST00000515264 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
ZNF346-IT1-201ENST00000515264 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
ZNF346-IT1-201ENST00000515264 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
ZNF346-IT1-201ENST00000515264 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
ZNF346-IT1-201ENST00000515264 FOXD1Q16676 465 aa24.24■■□□□ 1.47
ZNF346-IT1-201ENST00000515264 ADRA2BP18089 450 aa23.89■■□□□ 1.41
ZNF346-IT1-201ENST00000515264 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
ZNF346-IT1-201ENST00000515264 PIAS4Q8N2W9 510 aaPredicted RBP23.02■■□□□ 1.28
ZNF346-IT1-201ENST00000515264 KCNA4P22459 653 aa22.74■■□□□ 1.23
ZNF346-IT1-201ENST00000515264 PPP4R3CPQ6ZMV5 832 aa22.5■■□□□ 1.19
ZNF346-IT1-201ENST00000515264 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
ZNF346-IT1-201ENST00000515264 MSH5O43196 834 aa22.08■■□□□ 1.13
ZNF346-IT1-201ENST00000515264 EHMT2Q96KQ7 1210 aa21.92■■□□□ 1.1
ZNF346-IT1-201ENST00000515264 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
ZNF346-IT1-201ENST00000515264 NPM3O75607 178 aaKnown RBP21.78■■□□□ 1.08
ZNF346-IT1-201ENST00000515264 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
ZNF346-IT1-201ENST00000515264 CNKSR2Q8WXI2 1034 aa21.72■■□□□ 1.07
ZNF346-IT1-201ENST00000515264 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
ZNF346-IT1-201ENST00000515264 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
ZNF346-IT1-201ENST00000515264 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
ZNF346-IT1-201ENST00000515264 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
ZNF346-IT1-201ENST00000515264 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
ZNF346-IT1-201ENST00000515264 ZBTB22O15209 634 aa20.94■□□□□ 0.94
ZNF346-IT1-201ENST00000515264 HOXD11P31277 338 aaPredicted RBP20.87■□□□□ 0.93
ZNF346-IT1-201ENST00000515264 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
ZNF346-IT1-201ENST00000515264 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
ZNF346-IT1-201ENST00000515264 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
ZNF346-IT1-201ENST00000515264 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
ZNF346-IT1-201ENST00000515264 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
ZNF346-IT1-201ENST00000515264 ATXN8OSP0DMR3 200 aa19.96■□□□□ 0.79
ZNF346-IT1-201ENST00000515264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
ZNF346-IT1-201ENST00000515264 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
ZNF346-IT1-201ENST00000515264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
ZNF346-IT1-201ENST00000515264 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
ZNF346-IT1-201ENST00000515264 SAMD1Q6SPF0 538 aaPredicted RBP19.57■□□□□ 0.72
ZNF346-IT1-201ENST00000515264 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
ZNF346-IT1-201ENST00000515264 FKBP8Q14318 412 aa19.28■□□□□ 0.68
ZNF346-IT1-201ENST00000515264 APLP2Q06481 763 aa19.25■□□□□ 0.67
ZNF346-IT1-201ENST00000515264 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
ZNF346-IT1-201ENST00000515264 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
ZNF346-IT1-201ENST00000515264 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
ZNF346-IT1-201ENST00000515264 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
ZNF346-IT1-201ENST00000515264 C1QBPQ07021 282 aaKnown RBP18.8■□□□□ 0.6
ZNF346-IT1-201ENST00000515264 CAPN15O75808 1086 aa18.78■□□□□ 0.6
ZNF346-IT1-201ENST00000515264 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
ZNF346-IT1-201ENST00000515264 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
ZNF346-IT1-201ENST00000515264 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
ZNF346-IT1-201ENST00000515264 POLA2Q14181 598 aa18.7■□□□□ 0.58
ZNF346-IT1-201ENST00000515264 FBLN2P98095 1184 aa18.66■□□□□ 0.58
ZNF346-IT1-201ENST00000515264 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
ZNF346-IT1-201ENST00000515264 ABCB7O75027 752 aa18.48■□□□□ 0.55
ZNF346-IT1-201ENST00000515264 ZBTB12Q9Y330 459 aaPredicted RBP18.44■□□□□ 0.54
ZNF346-IT1-201ENST00000515264 PROM2Q8N271 834 aa18.42■□□□□ 0.54
ZNF346-IT1-201ENST00000515264 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
ZNF346-IT1-201ENST00000515264 DSG3P32926 999 aa18.31■□□□□ 0.52
ZNF346-IT1-201ENST00000515264 VASPP50552 380 aaPredicted RBP18.14■□□□□ 0.49
ZNF346-IT1-201ENST00000515264 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
ZNF346-IT1-201ENST00000515264 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
ZNF346-IT1-201ENST00000515264 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
ZNF346-IT1-201ENST00000515264 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
ZNF346-IT1-201ENST00000515264 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
ZNF346-IT1-201ENST00000515264 SPDYE2Q495Y8 402 aa18.01■□□□□ 0.47
ZNF346-IT1-201ENST00000515264 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
ZNF346-IT1-201ENST00000515264 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
ZNF346-IT1-201ENST00000515264 SSUH2Q9Y2M2 353 aa17.94■□□□□ 0.46
ZNF346-IT1-201ENST00000515264 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
ZNF346-IT1-201ENST00000515264 STAG3Q9UJ98 1225 aa17.81■□□□□ 0.44
ZNF346-IT1-201ENST00000515264 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
ZNF346-IT1-201ENST00000515264 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
ZNF346-IT1-201ENST00000515264 SPOCK2Q92563 424 aa17.62■□□□□ 0.41
ZNF346-IT1-201ENST00000515264 PKD2Q13563 968 aa17.61■□□□□ 0.41
ZNF346-IT1-201ENST00000515264 MIER1Q8N108 512 aa17.58■□□□□ 0.4
ZNF346-IT1-201ENST00000515264 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
ZNF346-IT1-201ENST00000515264 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
ZNF346-IT1-201ENST00000515264 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
ZNF346-IT1-201ENST00000515264 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
ZNF346-IT1-201ENST00000515264 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
ZNF346-IT1-201ENST00000515264 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
ZNF346-IT1-201ENST00000515264 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
ZNF346-IT1-201ENST00000515264 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
ZNF346-IT1-201ENST00000515264 CIZ1Q9ULV3 898 aaPredicted RBP17.23■□□□□ 0.35
ZNF346-IT1-201ENST00000515264 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
ZNF346-IT1-201ENST00000515264 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
ZNF346-IT1-201ENST00000515264 RGL2O15211 777 aa17.18■□□□□ 0.34
ZNF346-IT1-201ENST00000515264 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
ZNF346-IT1-201ENST00000515264 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
ZNF346-IT1-201ENST00000515264 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
ZNF346-IT1-201ENST00000515264 BBXQ8WY36 941 aaPredicted RBP17.09■□□□□ 0.33
ZNF346-IT1-201ENST00000515264 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
ZNF346-IT1-201ENST00000515264 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
ZNF346-IT1-201ENST00000515264 NUBP1P53384 320 aa17.07■□□□□ 0.32
ZNF346-IT1-201ENST00000515264 GSE1Q14687 1217 aa17.05■□□□□ 0.32
ZNF346-IT1-201ENST00000515264 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
ZNF346-IT1-201ENST00000515264 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
ZNF346-IT1-201ENST00000515264 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
ZNF346-IT1-201ENST00000515264 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
ZNF346-IT1-201ENST00000515264 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
ZNF346-IT1-201ENST00000515264 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
ZNF346-IT1-201ENST00000515264 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms