Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 AC004835.2-201ENST00000603762 682 ntBASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 AC003101.2-201ENST00000612557 442 ntBASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
BHLHE41Q9C0J9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 HIST3H2BA-201ENST00000436555 524 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SPDYE14P-201ENST00000442619 822 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 MIR3687-2-201ENST00000577708 61 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 RN7SL828P-201ENST00000607615 303 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 AL133215.2-201ENST00000609242 977 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 MIR3687-1-201ENST00000614492 61 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BHLHE41Q9C0J9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 KRT8P12-202ENST00000472924 1397 ntBASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BHLHE41Q9C0J9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms