Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC091167.2-201ENST00000579581 588 ntBASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AC083849.1-201ENST00000615227 514 ntBASIC14.85□□□□□ -0.03
NR1H4Q96RI1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 SPDYE13P-201ENST00000445314 798 ntBASIC14.84□□□□□ -0.03
NR1H4Q96RI1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 AC022616.7-201ENST00000525383 220 ntBASIC14.84□□□□□ -0.03
NR1H4Q96RI1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 RN7SL850P-201ENST00000579959 291 ntBASIC14.84□□□□□ -0.03
NR1H4Q96RI1 CYP2A7P1-201ENST00000595391 815 ntBASIC14.84□□□□□ -0.03
NR1H4Q96RI1 IGHV3-41-201ENST00000613121 348 ntBASIC14.84□□□□□ -0.03
NR1H4Q96RI1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H4Q96RI1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H4Q96RI1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.83□□□□□ -0.04
NR1H4Q96RI1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms