Protein–RNA interactions for Protein: Q92664

GTF3A, Transcription factor IIIA, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AQ92664 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF3AQ92664 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF3AQ92664 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF3AQ92664 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.6□□□□□ -0.23
GTF3AQ92664 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 EEF1DP4-201ENST00000446006 880 ntBASIC13.6□□□□□ -0.23
GTF3AQ92664 SERBP1P3-201ENST00000459980 809 ntBASIC13.6□□□□□ -0.23
GTF3AQ92664 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.6□□□□□ -0.23
GTF3AQ92664 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.6□□□□□ -0.23
GTF3AQ92664 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.6□□□□□ -0.23
GTF3AQ92664 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GTF3AQ92664 RN7SL204P-201ENST00000582831 262 ntBASIC13.6□□□□□ -0.23
GTF3AQ92664 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 AC092364.2-202ENST00000597012 1073 ntBASIC13.6□□□□□ -0.23
GTF3AQ92664 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GTF3AQ92664 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
GTF3AQ92664 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
GTF3AQ92664 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GTF3AQ92664 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GTF3AQ92664 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GTF3AQ92664 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC002472.2-201ENST00000442739 958 ntBASIC13.59□□□□□ -0.23
GTF3AQ92664 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC135586.1-201ENST00000539323 574 ntBASIC13.59□□□□□ -0.23
GTF3AQ92664 AC104794.3-201ENST00000566840 1248 ntBASIC13.59□□□□□ -0.23
GTF3AQ92664 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.59□□□□□ -0.23
GTF3AQ92664 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.59□□□□□ -0.23
GTF3AQ92664 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.59□□□□□ -0.23
GTF3AQ92664 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC020658.6-201ENST00000623564 1870 ntBASIC13.59□□□□□ -0.23
GTF3AQ92664 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.59□□□□□ -0.23
GTF3AQ92664 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.59□□□□□ -0.23
GTF3AQ92664 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GTF3AQ92664 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.58□□□□□ -0.23
GTF3AQ92664 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GTF3AQ92664 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.58□□□□□ -0.23
GTF3AQ92664 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
GTF3AQ92664 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.58□□□□□ -0.23
GTF3AQ92664 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.58□□□□□ -0.23
GTF3AQ92664 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.58□□□□□ -0.23
GTF3AQ92664 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GTF3AQ92664 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GTF3AQ92664 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms