Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNYL1Q8N7R7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 RPS8P6-201ENST00000426177 609 ntBASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AL450472.2-201ENST00000603663 1156 ntBASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AC008267.7-201ENST00000624570 1194 ntBASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 IL9RP2-201ENST00000423948 1312 ntBASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AL009178.2-201ENST00000597278 2719 ntBASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNYL1Q8N7R7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 AGAP7P-201ENST00000582299 2062 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 AGAP14-201ENST00000624701 2060 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 TFAMP1-201ENST00000412727 736 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 AL355306.1-201ENST00000415580 579 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 KRT8P44-201ENST00000441609 1350 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 C8orf49-201ENST00000525043 1968 ntBASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL1Q8N7R7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms