Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NANOGP1Q8N7R0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NANOGP1Q8N7R0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.02□□□□□ -0.17
NANOGP1Q8N7R0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 INTS4P1-203ENST00000641008 3683 ntBASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 RPS8P6-201ENST00000426177 609 ntBASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 AC098859.1-201ENST00000502915 1238 ntBASIC14.01□□□□□ -0.17
NANOGP1Q8N7R0 RNPS1P1-201ENST00000507437 918 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms