Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 AC092384.3-202ENST00000564646 2873 ntBASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 AC092127.1-201ENST00000567093 3455 ntBASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TTC9CQ8N5M4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TUBB3P1-201ENST00000405796 1332 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 AL607033.1-201ENST00000623900 1599 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 AL645939.2-201ENST00000427340 991 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 HLA-V-204ENST00000476601 1289 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 Z92544.3-201ENST00000624747 417 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 AC127383.1-201ENST00000444697 1800 ntBASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TTC9CQ8N5M4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC126177.1-201ENST00000547829 2218 ntBASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC067863.1-201ENST00000494933 530 ntBASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.44□□□□□ -0.42
TTC9CQ8N5M4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms