Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 RPL13P2-201ENST00000440687 659 ntBASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 RN7SL204P-201ENST00000582831 262 ntBASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 BTBD7P1-201ENST00000447253 1453 ntBASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC82Q8N4S0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 AC073347.1-201ENST00000421633 2643 ntBASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 AC090616.6-203ENST00000579186 1945 ntBASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TIMM17BP1-201ENST00000545713 516 ntBASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 SRD5A3P1-201ENST00000603021 949 ntBASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC82Q8N4S0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 SPDYE19P-201ENST00000338590 713 ntBASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 LINC02560-201ENST00000596379 459 ntBASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC82Q8N4S0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms