Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.43■□□□□ 0.54
RAB11FIP4Q86YS3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 BCRP1-201ENST00000444246 691 ntBASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RAB11FIP4Q86YS3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 RPL13P2-201ENST00000440687 659 ntBASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 SDHAP3-202ENST00000515467 728 ntBASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 AC074044.1-201ENST00000609673 707 ntBASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB11FIP4Q86YS3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB11FIP4Q86YS3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms