Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC092127.1-201ENST00000567093 3455 ntBASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC092552.1-201ENST00000547243 906 ntBASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 CTBP2P3-201ENST00000585629 1255 ntBASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AC012645.4-201ENST00000610691 1061 ntBASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
LRRTM4Q86VH4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AL442647.2-201ENST00000429864 857 ntBASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 AL049840.4-201ENST00000602422 811 ntBASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM4Q86VH4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms